FNCSI is a president led organization under him/her the General Secretary heads the secretariat of the organization. The secretariat consists of Administrative Division, Program division and Business Development Service division. Each division is headed by division chief under the Executive Director. The Executive Director is the chief of the secretariat’s core staffs.
The central office is equipped with documentation centre, training unit, computer lab, training and meeting hall. The secretariat at the moment employs 11 efficient full time staff. The secretariat has 4000 square feet of rented space equipped with necessary furniture fixture and equipment located at Maitighar Height, Kathmandu, Nepal.